Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 AC164625.1-201ENSMUST00000214034 3036 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm15018-201ENSMUST00000117090 633 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm15933-201ENSMUST00000117215 616 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm15129-201ENSMUST00000119673 279 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm8715-201ENSMUST00000162728 531 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm6434-201ENSMUST00000163316 372 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm17359-201ENSMUST00000164216 778 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm7502-201ENSMUST00000169235 733 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm25301-201ENSMUST00000175285 113 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm3307-201ENSMUST00000176164 632 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Mir6374-201ENSMUST00000184003 107 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Mir7212-201ENSMUST00000184098 61 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC7.03□□□□□ -1.28
Col8a1Q00780 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Serpinc1-202ENSMUST00000191936 725 ntTSL 3 BASIC7.03□□□□□ -1.28
Col8a1Q00780 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm43836-201ENSMUST00000196532 381 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm42634-201ENSMUST00000197362 381 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Mir3107-201ENSMUST00000199351 90 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm19764-201ENSMUST00000203630 649 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm18378-201ENSMUST00000216245 628 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm18242-201ENSMUST00000218455 542 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC7.03□□□□□ -1.28
Col8a1Q00780 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Mtmr6-201ENSMUST00000022563 3813 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm18289-201ENSMUST00000203356 2989 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm21569-201ENSMUST00000222683 2036 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
Col8a1Q00780 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm24334-201ENSMUST00000104210 128 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm22152-201ENSMUST00000116966 125 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm14975-201ENSMUST00000118741 664 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Vmn1r-ps113-201ENSMUST00000121318 1106 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm14840-201ENSMUST00000122135 594 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm14713-201ENSMUST00000122362 686 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm20637-201ENSMUST00000175715 462 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm27001-201ENSMUST00000182252 936 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms