Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp4P35123 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Usp4P35123 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.34□□□□□ -1.08
Usp4P35123 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Usp4P35123 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Usp4P35123 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Usp4P35123 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.33□□□□□ -1.08
Usp4P35123 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gm38195-201ENSMUST00000194247 1499 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Usp4P35123 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm15694-201ENSMUST00000121984 283 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm6723-201ENSMUST00000180449 441 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gm38280-201ENSMUST00000192610 158 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp4P35123 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Igkv12-42-201ENSMUST00000198769 327 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Gm17995-201ENSMUST00000209266 530 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gm3011-201ENSMUST00000215669 582 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 AC165281.1-201ENSMUST00000225713 1011 ntBASIC8.33□□□□□ -1.08
Usp4P35123 AC164879.1-201ENSMUST00000227904 1021 ntBASIC8.33□□□□□ -1.08
Usp4P35123 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp4P35123 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp4P35123 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.33□□□□□ -1.08
Usp4P35123 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp4P35123 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp4P35123 AC107757.2-201ENSMUST00000226370 1466 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 AC132467.1-201ENSMUST00000226498 1845 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp4P35123 Gm14099-201ENSMUST00000117769 605 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gm11875-201ENSMUST00000118187 799 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gm24063-201ENSMUST00000157491 105 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp4P35123 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp4P35123 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gm8868-201ENSMUST00000173591 577 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Mir6239-201ENSMUST00000183564 105 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.32□□□□□ -1.08
Usp4P35123 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gm29240-201ENSMUST00000187248 286 ntBASIC8.32□□□□□ -1.08
Usp4P35123 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp4P35123 Gm20936-201ENSMUST00000191049 658 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp4P35123 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp4P35123 Gm18060-201ENSMUST00000207407 564 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms