Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
Cdx1P18111 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Cdx1P18111 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm17229-202ENSMUST00000166792 1753 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm40309-201ENSMUST00000202699 1752 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm45210-201ENSMUST00000206401 1577 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 4933423L19Rik-201ENSMUST00000208432 1464 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm5065-201ENSMUST00000056639 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm42766-201ENSMUST00000200233 1332 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Reg3a-201ENSMUST00000101272 825 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx1P18111 Rhox4f-201ENSMUST00000115170 948 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm15048-201ENSMUST00000118201 954 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm12987-201ENSMUST00000118562 489 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm14156-201ENSMUST00000121538 483 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm15501-202ENSMUST00000140687 625 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Hk1os-203ENSMUST00000143122 1218 ntTSL 2 BASIC6.37□□□□□ -1.39
Cdx1P18111 Glipr1l2-202ENSMUST00000148897 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm23094-201ENSMUST00000157551 322 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Slc15a2-205ENSMUST00000164579 1068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm17042-201ENSMUST00000167075 1216 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Cdx1P18111 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC6.37□□□□□ -1.39
Cdx1P18111 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm28235-201ENSMUST00000185828 1120 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29586-202ENSMUST00000186478 1136 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm28969-204ENSMUST00000186554 1136 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29548-201ENSMUST00000187012 694 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29444-201ENSMUST00000187152 1156 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm28105-201ENSMUST00000187788 694 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29423-205ENSMUST00000189006 1138 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm28990-206ENSMUST00000190416 1136 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm29218-208ENSMUST00000191419 1136 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm37506-201ENSMUST00000192008 143 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm37108-201ENSMUST00000194605 626 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm37929-201ENSMUST00000195116 493 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm42628-201ENSMUST00000198498 764 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Olfr573-ps1-202ENSMUST00000210571 894 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx1P18111 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Cdx1P18111 Olfr860-203ENSMUST00000212353 1030 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx1P18111 Cldn10-201ENSMUST00000047761 1148 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Olfr573-ps1-201ENSMUST00000064830 888 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Gm22422-201ENSMUST00000083060 135 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.37□□□□□ -1.39
Cdx1P18111 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx1P18111 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx1P18111 Crbn-201ENSMUST00000013882 2072 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx1P18111 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Wdr5b-201ENSMUST00000042203 1784 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx1P18111 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Aox3-205ENSMUST00000162011 1568 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm28451-201ENSMUST00000189311 2560 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm9430-201ENSMUST00000121232 1527 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm22471-201ENSMUST00000104116 130 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx1P18111 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm5915-201ENSMUST00000116136 454 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm23840-201ENSMUST00000116950 97 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms