Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm43080-201ENSMUST00000199006 2643 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm29761-201ENSMUST00000215964 1939 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm12174-201ENSMUST00000119853 813 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm13622-201ENSMUST00000120658 433 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm13776-201ENSMUST00000122236 1261 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm14990-201ENSMUST00000122354 445 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm7420-201ENSMUST00000162836 842 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 AC154382.1-201ENSMUST00000220958 1282 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 CT030705.2-201ENSMUST00000225301 556 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm9256-201ENSMUST00000198106 1420 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm5228-201ENSMUST00000117186 357 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm15913-201ENSMUST00000118492 331 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm25692-201ENSMUST00000175444 125 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 Gm18501-201ENSMUST00000185363 664 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 AC154640.3-201ENSMUST00000227492 846 ntBASIC14.1□□□□□ -0.15
Ccdc180J3QNE4 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm20749-201ENSMUST00000186319 3492 ntBASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm15362-201ENSMUST00000121459 388 ntBASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm23077-201ENSMUST00000157854 116 ntBASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm21181-201ENSMUST00000186249 330 ntBASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 AC238940.2-201ENSMUST00000224202 330 ntBASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc180J3QNE4 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc180J3QNE4 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Gm44590-201ENSMUST00000206161 391 ntBASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Gm44892-201ENSMUST00000208595 488 ntBASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Gm44835-201ENSMUST00000205544 3181 ntBASIC14.08□□□□□ -0.16
Ccdc180J3QNE4 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms