Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm26684-202ENSMUST00000228229 8257 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm44080-201ENSMUST00000204451 2214 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm24781-201ENSMUST00000157636 117 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm23187-201ENSMUST00000175746 86 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm25617-201ENSMUST00000179548 133 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm25617-202ENSMUST00000198387 132 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm4585-201ENSMUST00000207218 452 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm45354-201ENSMUST00000199820 2557 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm42444-201ENSMUST00000199366 4558 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm15913-201ENSMUST00000118492 331 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm11850-201ENSMUST00000119679 479 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm14990-201ENSMUST00000122354 445 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm25782-201ENSMUST00000122526 289 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm25342-201ENSMUST00000157459 122 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm25690-201ENSMUST00000175439 77 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm38373-201ENSMUST00000192042 288 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm17611-202ENSMUST00000220613 814 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm5791-201ENSMUST00000220840 489 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Gm22581-201ENSMUST00000083735 136 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 BC085271-201ENSMUST00000191852 1487 ntBASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col4a6B1AVK5 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col4a6B1AVK5 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col4a6B1AVK5 AC121870.2-201ENSMUST00000214343 1870 ntBASIC7.91□□□□□ -1.14
Col4a6B1AVK5 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Col4a6B1AVK5 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms