Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Defa-ps16-201ENSMUST00000121939 171 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 4933407L21Rik-202ENSMUST00000129392 503 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm23897-201ENSMUST00000158110 158 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm17195-201ENSMUST00000170289 428 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm25196-201ENSMUST00000180171 110 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm8614-201ENSMUST00000182528 978 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm27913-201ENSMUST00000184473 173 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm37196-201ENSMUST00000194762 906 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm6853-201ENSMUST00000211160 1041 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm3011-201ENSMUST00000215669 582 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm5194-201ENSMUST00000221457 742 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 AC158523.2-201ENSMUST00000222708 548 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 AC123692.1-201ENSMUST00000227514 730 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Prpmp5-201ENSMUST00000048686 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Krtap10-4-201ENSMUST00000092369 981 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Nadk-202ENSMUST00000105612 2737 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm20589-201ENSMUST00000204099 2530 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Zbbx-202ENSMUST00000107775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Olfr170-202ENSMUST00000206562 1417 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Ambn-202ENSMUST00000198265 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm26597-201ENSMUST00000181648 1477 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm7609-202ENSMUST00000113407 853 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm15720-201ENSMUST00000117133 282 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm11514-201ENSMUST00000117670 432 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm14839-201ENSMUST00000117983 714 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Tmed5-206ENSMUST00000119784 689 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm14034-201ENSMUST00000120147 551 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm24854-201ENSMUST00000158025 98 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm22388-201ENSMUST00000158194 248 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm25975-201ENSMUST00000158702 125 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm23633-201ENSMUST00000175293 119 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm8993-201ENSMUST00000182182 983 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm28113-201ENSMUST00000188280 229 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms