Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 AC154552.5-201ENSMUST00000222352 207 ntBASIC10.05□□□□□ -0.8
Ube3bQ9ES34 AC123058.1-201ENSMUST00000223748 437 ntBASIC10.05□□□□□ -0.8
Ube3bQ9ES34 AC207128.1-201ENSMUST00000225928 799 ntBASIC10.05□□□□□ -0.8
Ube3bQ9ES34 CT009600.2-201ENSMUST00000226638 481 ntBASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Gm6083-201ENSMUST00000075518 357 ntBASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Ube3bQ9ES34 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm36930-201ENSMUST00000195431 2376 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm37100-201ENSMUST00000193344 1353 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 AC122357.2-201ENSMUST00000220732 1525 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm37949-201ENSMUST00000192808 2091 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm24048-201ENSMUST00000102411 106 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm12598-201ENSMUST00000117333 830 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm12465-201ENSMUST00000118591 300 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm24190-201ENSMUST00000157976 216 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm6695-201ENSMUST00000177264 1172 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm9120-201ENSMUST00000190835 994 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm37376-201ENSMUST00000192176 453 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Trav15d-3-201ENSMUST00000198604 167 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Clec2j-202ENSMUST00000203658 606 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm16475-202ENSMUST00000209033 528 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm7839-201ENSMUST00000210755 673 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm7546-202ENSMUST00000211354 275 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 AC134860.4-201ENSMUST00000223592 978 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 CT030254.1-201ENSMUST00000225450 1078 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 AC102815.1-201ENSMUST00000226662 1061 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 AC154738.2-201ENSMUST00000227403 1110 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm4953-201ENSMUST00000077309 483 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm43420-201ENSMUST00000198012 1857 ntBASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube3bQ9ES34 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm2136-201ENSMUST00000193945 2577 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms