Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RtcbQ99LF4 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RtcbQ99LF4 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm10601-201ENSMUST00000120436 1422 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm42515-201ENSMUST00000199936 3583 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm12851-201ENSMUST00000117920 421 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm13552-201ENSMUST00000118837 417 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm14739-201ENSMUST00000120424 802 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm17973-201ENSMUST00000174509 520 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Mir6340-201ENSMUST00000183857 119 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm37845-201ENSMUST00000194977 355 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 AC122397.3-201ENSMUST00000227097 527 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.92□□□□□ -0.82
RtcbQ99LF4 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RtcbQ99LF4 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm43341-201ENSMUST00000200104 1308 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 n-R5s172-201ENSMUST00000104508 114 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm11922-201ENSMUST00000118967 475 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm11726-201ENSMUST00000121028 424 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm12978-201ENSMUST00000121250 522 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm6838-201ENSMUST00000172851 582 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm45042-201ENSMUST00000207377 211 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm22362-201ENSMUST00000083102 134 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Mir455-201ENSMUST00000093594 82 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 AC154227.2-201ENSMUST00000228677 2101 ntBASIC9.91□□□□□ -0.82
RtcbQ99LF4 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RtcbQ99LF4 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC9.9□□□□□ -0.82
RtcbQ99LF4 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms