Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.21□□□□□ -0.93
Vps53Q8CCB4 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Vps53Q8CCB4 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Vps53Q8CCB4 Gm12344-201ENSMUST00000117087 329 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm15574-201ENSMUST00000119937 405 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm11962-201ENSMUST00000145746 255 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm26351-201ENSMUST00000157532 232 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm8407-201ENSMUST00000192719 427 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm17977-201ENSMUST00000198743 574 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm44252-201ENSMUST00000204187 330 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm7086-202ENSMUST00000228849 506 ntBASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Vps53Q8CCB4 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm17229-202ENSMUST00000166792 1753 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm23834-201ENSMUST00000104436 129 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm12306-201ENSMUST00000117256 171 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm13929-201ENSMUST00000117553 1125 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm26182-201ENSMUST00000157688 116 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm24050-201ENSMUST00000158623 290 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm24347-201ENSMUST00000158711 142 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm36996-201ENSMUST00000194466 250 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm43664-201ENSMUST00000196038 734 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm43084-201ENSMUST00000200696 947 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm44902-201ENSMUST00000206177 805 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 AC114585.2-203ENSMUST00000228400 339 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Gm42981-201ENSMUST00000200184 3252 ntBASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Vps53Q8CCB4 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Vps53Q8CCB4 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms