Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc88cQ6VGS5 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc88cQ6VGS5 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc88cQ6VGS5 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm13525-201ENSMUST00000120607 478 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm7436-201ENSMUST00000187229 391 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43812-202ENSMUST00000202701 581 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm18972-201ENSMUST00000218873 630 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm12123-201ENSMUST00000120348 472 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm42464-202ENSMUST00000198111 774 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm32899-201ENSMUST00000219694 207 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm40853-201ENSMUST00000221342 582 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm9255-201ENSMUST00000223225 581 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 AV026068-229ENSMUST00000225516 595 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Gm25926-201ENSMUST00000082899 160 ntBASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc88cQ6VGS5 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm44531-201ENSMUST00000208364 2000 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm16044-201ENSMUST00000118475 450 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm10012-202ENSMUST00000170379 372 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm28006-201ENSMUST00000183841 122 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm10123-201ENSMUST00000075723 490 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm20900-201ENSMUST00000078729 472 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Gm38339-201ENSMUST00000195479 1829 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms