Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm37185-201ENSMUST00000193852 410 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm37929-201ENSMUST00000195116 493 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Ighv10-2-201ENSMUST00000195182 298 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Ermard-209ENSMUST00000226561 1019 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm25607-201ENSMUST00000104020 127 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm12460-201ENSMUST00000117147 357 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm4120-201ENSMUST00000220456 578 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 AC123867.1-201ENSMUST00000224990 816 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim43aQ3TL54 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm5915-201ENSMUST00000116136 454 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm11676-201ENSMUST00000120443 490 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm11622-201ENSMUST00000120525 691 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm12780-201ENSMUST00000122458 645 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm23094-201ENSMUST00000157551 322 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm3275-201ENSMUST00000169145 487 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm43287-201ENSMUST00000197747 600 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 AC132384.10-201ENSMUST00000217862 1204 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms