Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Rrp1P56183 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rrp1P56183 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rrp1P56183 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rrp1P56183 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rrp1P56183 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.78□□□□□ -1
Rrp1P56183 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Rrp1P56183 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rrp1P56183 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm11622-201ENSMUST00000120525 691 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Gm6689-201ENSMUST00000130905 481 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm5698-201ENSMUST00000178317 724 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Gm7369-201ENSMUST00000192738 936 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.77□□□□□ -1.01
Rrp1P56183 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm4178-201ENSMUST00000218307 649 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 AC152946.3-201ENSMUST00000219424 280 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rrp1P56183 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rrp1P56183 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rrp1P56183 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rrp1P56183 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.77□□□□□ -1.01
Rrp1P56183 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rrp1P56183 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.77□□□□□ -1.01
Rrp1P56183 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm23946-201ENSMUST00000104423 197 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm26344-201ENSMUST00000104553 132 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm14328-201ENSMUST00000122178 408 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.76□□□□□ -1.01
Rrp1P56183 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Rrp1P56183 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm37108-201ENSMUST00000194605 626 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm5708-201ENSMUST00000196289 886 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm7565-201ENSMUST00000203611 623 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm44245-201ENSMUST00000204304 232 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Gm9110-201ENSMUST00000219035 617 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.76□□□□□ -1.01
Rrp1P56183 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rrp1P56183 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rrp1P56183 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.75□□□□□ -1.01
Rrp1P56183 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.75□□□□□ -1.01
Rrp1P56183 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rrp1P56183 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Rrp1P56183 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rrp1P56183 Gm11241-201ENSMUST00000117371 896 ntBASIC8.75□□□□□ -1.01
Rrp1P56183 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms