Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cux1P53564 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC11.86□□□□□ -0.51
Cux1P53564 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm26025-201ENSMUST00000158655 271 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm2619-202ENSMUST00000166777 651 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm5656-201ENSMUST00000171020 1096 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm23018-201ENSMUST00000177928 109 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Mir6908-201ENSMUST00000184056 63 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Cux1P53564 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cux1P53564 Gm45478-201ENSMUST00000209472 211 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 AC122346.2-201ENSMUST00000224326 2931 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cux1P53564 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cux1P53564 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Gm18537-202ENSMUST00000206215 1503 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Gm13260-201ENSMUST00000117797 1264 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Gm9311-201ENSMUST00000118042 1269 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Gm13798-201ENSMUST00000118285 139 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC11.85□□□□□ -0.51
Cux1P53564 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Cux1P53564 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cux1P53564 Gm23187-201ENSMUST00000175746 86 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC11.85□□□□□ -0.51
Cux1P53564 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC11.85□□□□□ -0.51
Cux1P53564 Gm29369-201ENSMUST00000190674 615 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Gm42734-201ENSMUST00000201656 878 ntBASIC11.85□□□□□ -0.51
Cux1P53564 AC133948.2-201ENSMUST00000217850 378 ntBASIC11.85□□□□□ -0.51
Cux1P53564 CT009527.2-201ENSMUST00000225386 606 ntBASIC11.85□□□□□ -0.51
Cux1P53564 n-R5s41-201ENSMUST00000083025 119 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cux1P53564 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Gm37995-201ENSMUST00000194958 1714 ntBASIC11.85□□□□□ -0.51
Cux1P53564 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cux1P53564 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cux1P53564 Gm37382-201ENSMUST00000193032 1596 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm42700-201ENSMUST00000199071 2437 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC11.84□□□□□ -0.51
Cux1P53564 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm15538-201ENSMUST00000121410 313 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Gm13221-201ENSMUST00000121712 430 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC11.84□□□□□ -0.51
Cux1P53564 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Mir6921-201ENSMUST00000183719 80 ntBASIC11.84□□□□□ -0.51
Cux1P53564 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 Gm44356-201ENSMUST00000196731 111 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Gm8479-201ENSMUST00000203825 718 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Gm44258-201ENSMUST00000204925 301 ntBASIC11.84□□□□□ -0.51
Cux1P53564 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cux1P53564 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC11.84□□□□□ -0.51
Cux1P53564 AC061963.2-201ENSMUST00000213541 2739 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms