Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25501-201ENSMUST00000104429 132 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm22709-201ENSMUST00000116893 111 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm13255-201ENSMUST00000117255 547 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm11241-201ENSMUST00000117371 896 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Mir1932-201ENSMUST00000157390 90 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm22552-201ENSMUST00000157796 337 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm23822-201ENSMUST00000158739 128 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm17063-201ENSMUST00000168135 456 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm6695-201ENSMUST00000177264 1172 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm28478-201ENSMUST00000185802 183 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm37282-201ENSMUST00000191987 164 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm37665-201ENSMUST00000192353 149 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm8010-201ENSMUST00000194128 873 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm43835-201ENSMUST00000195932 149 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm43535-201ENSMUST00000197846 164 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm43013-201ENSMUST00000198216 247 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm44379-201ENSMUST00000204501 164 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm44268-201ENSMUST00000204814 164 ntBASIC8.35□□□□□ -1.07
Usp4P35123 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Gm45756-201ENSMUST00000212491 407 ntBASIC8.35□□□□□ -1.07
Usp4P35123 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 AC096628.1-201ENSMUST00000226060 641 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp4P35123 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Usp4P35123 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Usp4P35123 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Gm6348-201ENSMUST00000200751 1443 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Gm6346-201ENSMUST00000201146 1443 ntBASIC8.35□□□□□ -1.07
Usp4P35123 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp4P35123 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp4P35123 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Gm43216-201ENSMUST00000196295 1333 ntBASIC8.34□□□□□ -1.07
Usp4P35123 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp4P35123 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Usp4P35123 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Gm14336-201ENSMUST00000117491 475 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm11649-201ENSMUST00000118214 375 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Gm12727-201ENSMUST00000119885 359 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm15574-201ENSMUST00000119937 405 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm13358-201ENSMUST00000121427 569 ntBASIC8.34□□□□□ -1.07
Usp4P35123 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.34□□□□□ -1.07
Usp4P35123 Gm3275-201ENSMUST00000169145 487 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm27043-201ENSMUST00000182807 958 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm6394-201ENSMUST00000197077 477 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC8.34□□□□□ -1.07
Usp4P35123 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC8.34□□□□□ -1.07
Usp4P35123 Gm2734-201ENSMUST00000208561 743 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp4P35123 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp4P35123 AC132304.1-201ENSMUST00000218860 135 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm4120-201ENSMUST00000220456 578 ntBASIC8.34□□□□□ -1.07
Usp4P35123 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.34□□□□□ -1.07
Usp4P35123 AC131743.3-201ENSMUST00000222099 662 ntBASIC8.34□□□□□ -1.07
Usp4P35123 Gm2915-201ENSMUST00000222565 787 ntBASIC8.34□□□□□ -1.07
Usp4P35123 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.34□□□□□ -1.07
Usp4P35123 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Usp4P35123 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp4P35123 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms