Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P20040 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
P20040 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
P20040 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
P20040 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P20040 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
P20040 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
P20040 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC6.95□□□□□ -1.3
P20040 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
P20040 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm43544-201ENSMUST00000196474 2472 ntBASIC6.94□□□□□ -1.3
P20040 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.94□□□□□ -1.3
P20040 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.94□□□□□ -1.3
P20040 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.94□□□□□ -1.3
P20040 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P20040 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
P20040 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.94□□□□□ -1.3
P20040 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Gm13750-201ENSMUST00000117621 465 ntBASIC6.94□□□□□ -1.3
P20040 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.94□□□□□ -1.3
P20040 Gm5883-201ENSMUST00000120735 495 ntBASIC6.94□□□□□ -1.3
P20040 Gm11585-201ENSMUST00000120901 569 ntBASIC6.94□□□□□ -1.3
P20040 Gm15989-201ENSMUST00000121895 498 ntBASIC6.94□□□□□ -1.3
P20040 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.94□□□□□ -1.3
P20040 Gm17051-201ENSMUST00000170787 487 ntBASIC6.94□□□□□ -1.3
P20040 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.94□□□□□ -1.3
P20040 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC6.94□□□□□ -1.3
P20040 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.94□□□□□ -1.3
P20040 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm38051-201ENSMUST00000193740 433 ntBASIC6.94□□□□□ -1.3
P20040 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.94□□□□□ -1.3
P20040 Gm45549-201ENSMUST00000210180 975 ntBASIC6.94□□□□□ -1.3
P20040 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 AC114585.2-203ENSMUST00000228400 339 ntBASIC6.94□□□□□ -1.3
P20040 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P20040 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.94□□□□□ -1.3
P20040 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.94□□□□□ -1.3
P20040 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.94□□□□□ -1.3
P20040 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P20040 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P20040 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.94□□□□□ -1.3
P20040 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC6.94□□□□□ -1.3
P20040 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.94□□□□□ -1.3
P20040 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Grik1-209ENSMUST00000227986 2942 ntBASIC6.94□□□□□ -1.3
P20040 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
P20040 Gm42700-201ENSMUST00000199071 2437 ntBASIC6.93□□□□□ -1.3
P20040 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
P20040 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
P20040 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
P20040 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
P20040 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.93□□□□□ -1.3
P20040 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.93□□□□□ -1.3
P20040 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
P20040 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
P20040 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.93□□□□□ -1.3
P20040 Gm6181-201ENSMUST00000117187 264 ntBASIC6.93□□□□□ -1.3
P20040 Gm15154-201ENSMUST00000117590 366 ntBASIC6.93□□□□□ -1.3
P20040 Gm15224-201ENSMUST00000120501 388 ntBASIC6.93□□□□□ -1.3
P20040 Gm15062-201ENSMUST00000120567 367 ntBASIC6.93□□□□□ -1.3
P20040 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.93□□□□□ -1.3
P20040 Gm2214-201ENSMUST00000121333 330 ntBASIC6.93□□□□□ -1.3
P20040 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC6.93□□□□□ -1.3
P20040 Gm28428-201ENSMUST00000188886 697 ntBASIC6.93□□□□□ -1.3
P20040 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms