Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Cmah-208ENSMUST00000224819 9482 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s102-201ENSMUST00000101990 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Sdc1P18828 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm6706-201ENSMUST00000145087 318 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm8046-201ENSMUST00000172151 616 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Mir3078-201ENSMUST00000175231 87 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s101-201ENSMUST00000177910 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s114-201ENSMUST00000178297 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Tcstv3-201ENSMUST00000178349 510 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s119-201ENSMUST00000178861 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s127-201ENSMUST00000179185 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s129-201ENSMUST00000180122 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 n-R5s131-201ENSMUST00000180280 119 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm18352-201ENSMUST00000189113 902 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm28864-201ENSMUST00000189251 644 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm17530-201ENSMUST00000194336 472 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm43117-201ENSMUST00000198531 379 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC6.25□□□□□ -1.41
Sdc1P18828 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 CT030657.4-201ENSMUST00000222177 744 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 AC124400.2-201ENSMUST00000224939 253 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 CT025630.3-201ENSMUST00000228798 835 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sdc1P18828 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm15433-201ENSMUST00000097671 891 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.25□□□□□ -1.41
Sdc1P18828 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC6.25□□□□□ -1.41
Sdc1P18828 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Rap1gds1-209ENSMUST00000200396 2622 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sdc1P18828 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 Gm7790-201ENSMUST00000118716 1310 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC6.25□□□□□ -1.41
Sdc1P18828 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC6.25□□□□□ -1.41
Sdc1P18828 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Sdc1P18828 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.24□□□□□ -1.41
Sdc1P18828 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.24□□□□□ -1.41
Sdc1P18828 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm11628-201ENSMUST00000117568 171 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC6.24□□□□□ -1.41
Sdc1P18828 Gm15464-201ENSMUST00000118718 431 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm13726-201ENSMUST00000121278 794 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm14609-201ENSMUST00000122176 902 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Gm14380-201ENSMUST00000122298 431 ntBASIC6.24□□□□□ -1.41
Sdc1P18828 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms