Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col4a6B1AVK5 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col4a6B1AVK5 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col4a6B1AVK5 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col4a6B1AVK5 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col4a6B1AVK5 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm22671-201ENSMUST00000104420 134 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm8421-201ENSMUST00000119439 305 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm11474-201ENSMUST00000120814 277 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Mir1930-201ENSMUST00000158799 84 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm20530-201ENSMUST00000174261 254 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm27602-201ENSMUST00000183861 111 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm37017-201ENSMUST00000195266 747 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm45478-201ENSMUST00000209472 211 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.94□□□□□ -1.14
Col4a6B1AVK5 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col4a6B1AVK5 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm13622-201ENSMUST00000120658 433 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm43846-201ENSMUST00000200502 932 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col4a6B1AVK5 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms