Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm16057-201ENSMUST00000120811 759 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm25780-201ENSMUST00000122528 253 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm26407-201ENSMUST00000158504 307 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm4891-201ENSMUST00000182279 912 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm18207-201ENSMUST00000205486 526 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm8995-202ENSMUST00000208417 3490 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm22022-201ENSMUST00000104355 127 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm24195-201ENSMUST00000116804 137 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm15047-201ENSMUST00000118891 454 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm14824-201ENSMUST00000119421 737 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm28728-201ENSMUST00000189087 405 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Upk3aQ9JKX8 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Upk3aQ9JKX8 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms