Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm37121-201ENSMUST00000192219 2556 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm15931-201ENSMUST00000118066 1852 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm7701-201ENSMUST00000163185 1479 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm28410-201ENSMUST00000188113 1450 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Mpp1-203ENSMUST00000114092 1378 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm14394-201ENSMUST00000120307 295 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm14407-201ENSMUST00000121260 447 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 4930579M01Rik-201ENSMUST00000130943 933 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm24962-201ENSMUST00000157917 109 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm23046-201ENSMUST00000158369 284 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm25713-201ENSMUST00000158625 109 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Mrgpra2b-202ENSMUST00000172559 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm10637-201ENSMUST00000183718 828 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm21784-201ENSMUST00000186639 694 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm7893-201ENSMUST00000189666 225 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm5979-201ENSMUST00000193850 571 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm44233-201ENSMUST00000203616 226 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm8268-201ENSMUST00000209683 458 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC156795.1-201ENSMUST00000214655 414 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC164092.2-201ENSMUST00000214808 753 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm32300-201ENSMUST00000221735 515 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm7557-201ENSMUST00000221935 865 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC139845.2-201ENSMUST00000227504 436 ntBASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Olfr1222-201ENSMUST00000099794 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 B230303A05Rik-201ENSMUST00000220672 2706 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Cep112-206ENSMUST00000130515 3395 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Mlst8-202ENSMUST00000179163 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Zwint-201ENSMUST00000020081 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim39Q9ESN2 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim39Q9ESN2 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm23129-201ENSMUST00000104259 132 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm11565-201ENSMUST00000105053 921 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm13771-201ENSMUST00000117988 238 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm13988-201ENSMUST00000119363 288 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm15369-201ENSMUST00000119681 394 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm15379-201ENSMUST00000121224 648 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Gm14514-201ENSMUST00000121680 940 ntBASIC8.02□□□□□ -1.13
Trim39Q9ESN2 Defa-ps17-201ENSMUST00000121849 171 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms