Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm9697-201ENSMUST00000147052 997 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm18779-201ENSMUST00000173444 577 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Mir8095-201ENSMUST00000185103 129 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm5251-201ENSMUST00000188959 472 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm4545-201ENSMUST00000190797 603 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm37139-201ENSMUST00000192134 4419 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm7542-201ENSMUST00000201140 777 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 AC124715.2-201ENSMUST00000226762 617 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm5614-201ENSMUST00000091097 318 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.96□□□□□ -1.29
Scrt1Q99M85 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.96□□□□□ -1.29
Scrt1Q99M85 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC6.96□□□□□ -1.29
Scrt1Q99M85 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.96□□□□□ -1.29
Scrt1Q99M85 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Scrt1Q99M85 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm22231-201ENSMUST00000101027 73 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm12365-201ENSMUST00000117931 568 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm13463-201ENSMUST00000119020 233 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Mir1968-201ENSMUST00000157429 68 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm6750-201ENSMUST00000189273 268 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm28193-201ENSMUST00000189863 615 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm37339-201ENSMUST00000194142 392 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm43743-201ENSMUST00000197898 697 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm40319-201ENSMUST00000199785 481 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm44147-201ENSMUST00000204658 94 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm30646-201ENSMUST00000207662 180 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 AC159301.1-202ENSMUST00000225860 2133 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 AC131100.1-201ENSMUST00000226328 470 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm28229-201ENSMUST00000188747 2153 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms