Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Npr3-204ENSMUST00000228489 1969 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm14328-201ENSMUST00000122178 408 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm26455-201ENSMUST00000175300 92 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm25193-201ENSMUST00000176615 97 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Mir6973a-201ENSMUST00000183646 78 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Tspy-ps-203ENSMUST00000186546 989 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm29362-201ENSMUST00000187898 133 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm7442-201ENSMUST00000197778 383 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm43787-201ENSMUST00000197792 1037 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm44159-201ENSMUST00000204065 442 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm32842-201ENSMUST00000212653 738 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm6150-201ENSMUST00000217775 577 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm18621-201ENSMUST00000222677 679 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 AC132863.1-201ENSMUST00000228413 751 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 n-R5s28-201ENSMUST00000082814 119 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Gm26132-201ENSMUST00000083166 148 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Snora57-201ENSMUST00000093658 148 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 AC154738.6-201ENSMUST00000227225 1352 ntBASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Nup35Q8R4R6 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Nup35Q8R4R6 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
Nup35Q8R4R6 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
Nup35Q8R4R6 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm24542-201ENSMUST00000103870 110 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm15047-201ENSMUST00000118891 454 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm12687-201ENSMUST00000119752 706 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm3275-201ENSMUST00000169145 487 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm23187-201ENSMUST00000175746 86 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm23403-201ENSMUST00000179169 110 ntBASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.27□□□□□ -1.41
Nup35Q8R4R6 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms