Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Gm26967-201ENSMUST00000182878 2303 ntBASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 AC107453.1-201ENSMUST00000227490 3268 ntBASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm16409-201ENSMUST00000100510 747 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm23192-201ENSMUST00000102434 96 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm13255-201ENSMUST00000117255 547 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm9143-201ENSMUST00000120745 745 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm8172-201ENSMUST00000120762 750 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm9670-201ENSMUST00000121201 540 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm8696-201ENSMUST00000174777 385 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Mir6999-201ENSMUST00000183498 61 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm7560-201ENSMUST00000187748 873 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm42861-201ENSMUST00000199596 634 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm44156-201ENSMUST00000203885 1189 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm43670-201ENSMUST00000199047 1767 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm6786-201ENSMUST00000203165 1915 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm44187-201ENSMUST00000204735 1929 ntBASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cchcr1Q8K2I2 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Mir705-201ENSMUST00000102058 82 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm13573-201ENSMUST00000116410 631 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm8688-201ENSMUST00000118240 969 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm5761-201ENSMUST00000119238 834 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm28645-201ENSMUST00000185859 564 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm17867-201ENSMUST00000188981 391 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm44245-201ENSMUST00000204304 232 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm45475-201ENSMUST00000209381 309 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 AC123867.1-201ENSMUST00000224990 816 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 AC124196.1-201ENSMUST00000225970 1032 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Cacna2d3-208ENSMUST00000225985 918 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 AC107452.2-201ENSMUST00000228415 363 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Olfr120-201ENSMUST00000077498 993 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 CT009480.1-201ENSMUST00000225771 4480 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cchcr1Q8K2I2 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms