Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC131710.2-201ENSMUST00000226773 683 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 CT009515.1-201ENSMUST00000228127 586 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Gm10805-201ENSMUST00000099710 399 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Gm5402-201ENSMUST00000119588 1618 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.26□□□□□ -0.93
Nup88Q8CEC0 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm12219-201ENSMUST00000119198 443 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm15049-201ENSMUST00000120474 463 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm26408-201ENSMUST00000157672 127 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm18024-201ENSMUST00000218516 690 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 AC114585.2-203ENSMUST00000228400 339 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm5316-201ENSMUST00000050391 270 ntBASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup88Q8CEC0 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm45737-201ENSMUST00000208344 1612 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm22119-201ENSMUST00000175594 99 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm20813-201ENSMUST00000186646 705 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm21923-201ENSMUST00000188455 696 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm45283-201ENSMUST00000210593 628 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm45888-201ENSMUST00000212348 1229 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm3011-201ENSMUST00000215669 582 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 AC163038.4-201ENSMUST00000224942 474 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm24046-201ENSMUST00000083111 165 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm8836-201ENSMUST00000198196 1348 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Gm19031-201ENSMUST00000176280 1365 ntBASIC9.24□□□□□ -0.93
Nup88Q8CEC0 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms