Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Col16a1Q8BLX7 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 AC159379.2-201ENSMUST00000220244 2482 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm16433-201ENSMUST00000062429 1984 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm9256-201ENSMUST00000198106 1420 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm42969-201ENSMUST00000199858 3631 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm12713-201ENSMUST00000118404 764 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm14353-201ENSMUST00000122200 869 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm44356-201ENSMUST00000196731 111 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm43147-201ENSMUST00000196944 542 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm4585-201ENSMUST00000207218 452 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm8168-201ENSMUST00000209631 948 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Gm45506-201ENSMUST00000211620 280 ntBASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col16a1Q8BLX7 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 AC123705.1-201ENSMUST00000222512 2058 ntBASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm12635-201ENSMUST00000117285 752 ntBASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm13622-201ENSMUST00000120658 433 ntBASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm37920-201ENSMUST00000192952 749 ntBASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Col16a1Q8BLX7 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm43839-201ENSMUST00000196183 2325 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm11474-201ENSMUST00000120814 277 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm23187-201ENSMUST00000175746 86 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Mir7084-201ENSMUST00000183876 70 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 CT030166.4-201ENSMUST00000220640 404 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 AC123920.1-201ENSMUST00000221449 384 ntBASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col16a1Q8BLX7 Gm24036-201ENSMUST00000082868 156 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms