Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm23192-201ENSMUST00000102434 96 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm11897-201ENSMUST00000121976 828 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC8.82□□□□□ -1
Sh3bp1P55194 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm37929-201ENSMUST00000195116 493 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.82□□□□□ -1
Sh3bp1P55194 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm29807-201ENSMUST00000220161 372 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC8.82□□□□□ -1
Sh3bp1P55194 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 AC123867.1-201ENSMUST00000224990 816 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.82□□□□□ -1
Sh3bp1P55194 Ucn2-201ENSMUST00000052724 1155 ntAPPRIS P1 BASIC8.82□□□□□ -1
Sh3bp1P55194 Gm5590-201ENSMUST00000059110 345 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC8.82□□□□□ -1
Sh3bp1P55194 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Sh3bp1P55194 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Sh3bp1P55194 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 AC079245.1-201ENSMUST00000215680 1454 ntBASIC8.82□□□□□ -1
Sh3bp1P55194 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Sh3bp1P55194 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.81□□□□□ -1
Sh3bp1P55194 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm12817-201ENSMUST00000119622 610 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm15220-201ENSMUST00000120730 379 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm11203-201ENSMUST00000122169 741 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm26040-201ENSMUST00000158147 161 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm24327-201ENSMUST00000175108 78 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC8.81□□□□□ -1
Sh3bp1P55194 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm2734-201ENSMUST00000208561 743 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm16475-202ENSMUST00000209033 528 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm7850-201ENSMUST00000212909 712 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gm4178-201ENSMUST00000218307 649 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gm9118-201ENSMUST00000219246 754 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 AC153862.1-201ENSMUST00000215700 3349 ntBASIC8.81□□□□□ -1
Sh3bp1P55194 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sh3bp1P55194 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC8.81□□□□□ -1
Sh3bp1P55194 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sh3bp1P55194 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Sh3bp1P55194 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Sh3bp1P55194 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sh3bp1P55194 Gm7203-201ENSMUST00000210880 1404 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms