Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm12635-201ENSMUST00000117285 752 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gm11474-201ENSMUST00000120814 277 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC11.89□□□□□ -0.51
Cux1P53564 Gm24682-201ENSMUST00000158764 137 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Gm7651-201ENSMUST00000173398 901 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gm27373-201ENSMUST00000184017 184 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gm43849-201ENSMUST00000201086 215 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 AC124572.1-201ENSMUST00000218155 2406 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC11.89□□□□□ -0.51
Cux1P53564 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Gm8004-201ENSMUST00000187782 617 ntBASIC11.88□□□□□ -0.51
Cux1P53564 Gm37260-201ENSMUST00000193748 1251 ntBASIC11.88□□□□□ -0.51
Cux1P53564 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC11.88□□□□□ -0.51
Cux1P53564 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC11.88□□□□□ -0.51
Cux1P53564 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cux1P53564 AC151901.1-201ENSMUST00000218274 180 ntBASIC11.88□□□□□ -0.51
Cux1P53564 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cux1P53564 AC102676.1-201ENSMUST00000228131 719 ntBASIC11.88□□□□□ -0.51
Cux1P53564 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC11.88□□□□□ -0.51
Cux1P53564 Gm9256-201ENSMUST00000198106 1420 ntBASIC11.88□□□□□ -0.51
Cux1P53564 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cux1P53564 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cux1P53564 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cux1P53564 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 AC159379.2-201ENSMUST00000220244 2482 ntBASIC11.87□□□□□ -0.51
Cux1P53564 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Cux1P53564 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC11.87□□□□□ -0.51
Cux1P53564 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cux1P53564 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cux1P53564 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cux1P53564 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC11.87□□□□□ -0.51
Cux1P53564 Mir8120-201ENSMUST00000185035 139 ntBASIC11.87□□□□□ -0.51
Cux1P53564 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC11.87□□□□□ -0.51
Cux1P53564 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC11.87□□□□□ -0.51
Cux1P53564 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cux1P53564 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC11.87□□□□□ -0.51
Cux1P53564 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cux1P53564 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cux1P53564 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm25344-201ENSMUST00000104503 132 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cux1P53564 Gm5228-201ENSMUST00000117186 357 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm13423-201ENSMUST00000117205 888 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC11.86□□□□□ -0.51
Cux1P53564 Gm13156-201ENSMUST00000118348 321 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm13486-201ENSMUST00000119910 282 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Cux1P53564 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC11.86□□□□□ -0.51
Cux1P53564 Mir7084-201ENSMUST00000183876 70 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC11.86□□□□□ -0.51
Cux1P53564 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm42969-201ENSMUST00000199858 3631 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cux1P53564 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC11.86□□□□□ -0.51
Cux1P53564 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cux1P53564 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cux1P53564 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 AC122426.1-201ENSMUST00000214736 2235 ntBASIC11.86□□□□□ -0.51
Cux1P53564 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cux1P53564 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms