Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm13526-201ENSMUST00000117970 189 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm14645-201ENSMUST00000118597 417 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm15079-201ENSMUST00000121943 216 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm23663-201ENSMUST00000158045 80 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm43013-201ENSMUST00000198216 247 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm44245-201ENSMUST00000204304 232 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC7.79□□□□□ -1.16
Hoxa4P06798 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.79□□□□□ -1.16
Hoxa4P06798 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxa4P06798 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxa4P06798 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm12955-201ENSMUST00000119689 957 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm5406-201ENSMUST00000120054 766 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm26407-201ENSMUST00000158504 307 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm6838-201ENSMUST00000172851 582 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.78□□□□□ -1.16
Hoxa4P06798 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm45756-201ENSMUST00000212491 407 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm10123-201ENSMUST00000075723 490 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.78□□□□□ -1.16
Hoxa4P06798 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms