Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm13735-201ENSMUST00000120217 670 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm20452-201ENSMUST00000174686 513 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm7341-201ENSMUST00000192183 926 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm44508-201ENSMUST00000206943 1157 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 AC122539.1-201ENSMUST00000219925 329 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 AC122459.3-201ENSMUST00000228508 1042 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm8107-201ENSMUST00000117477 2009 ntBASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm13229-201ENSMUST00000118238 340 ntBASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm16523-201ENSMUST00000121253 592 ntBASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 AC108947.1-201ENSMUST00000224274 1000 ntBASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 CT009733.1-202ENSMUST00000224941 441 ntBASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc180J3QNE4 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gm7481-201ENSMUST00000182020 995 ntBASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gm9114-201ENSMUST00000188558 997 ntBASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 AC123705.1-201ENSMUST00000222512 2058 ntBASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gm37372-201ENSMUST00000193577 3311 ntBASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc180J3QNE4 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Ccdc180J3QNE4 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm11416-201ENSMUST00000119111 863 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm11726-201ENSMUST00000121028 424 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm24411-201ENSMUST00000083428 131 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms