Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm5915-201ENSMUST00000116136 454 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm14056-201ENSMUST00000117198 642 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm15741-201ENSMUST00000119401 754 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm15989-201ENSMUST00000121895 498 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm12517-201ENSMUST00000122082 425 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm25332-201ENSMUST00000158038 105 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Tctex1d1-206ENSMUST00000169211 1000 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm24083-201ENSMUST00000175174 120 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm26436-201ENSMUST00000180325 132 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm29145-201ENSMUST00000189914 456 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm3489-201ENSMUST00000190083 528 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm42667-201ENSMUST00000196132 234 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm43805-201ENSMUST00000198488 824 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm10145-201ENSMUST00000077776 462 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm10705-201ENSMUST00000098980 461 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm44001-201ENSMUST00000203158 3773 ntBASIC7.54□□□□□ -1.2
Clrn1Q8K445 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm24257-201ENSMUST00000104472 131 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm12460-201ENSMUST00000117147 357 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm15355-201ENSMUST00000118929 285 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm13726-201ENSMUST00000121278 794 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm22993-201ENSMUST00000175423 254 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Mir8110-201ENSMUST00000183771 97 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm18697-201ENSMUST00000191179 2126 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm37371-201ENSMUST00000194837 392 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm44332-201ENSMUST00000203712 433 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm45255-201ENSMUST00000209943 811 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 AC153544.1-201ENSMUST00000217988 400 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm9472-201ENSMUST00000221625 526 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 AC140209.1-201ENSMUST00000227875 284 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.53□□□□□ -1.2
Clrn1Q8K445 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms