Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Gm12661-201ENSMUST00000118780 3335 ntBASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.24□□□□□ -0.93
Cchcr1Q8K2I2 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm12851-201ENSMUST00000117920 421 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm12611-201ENSMUST00000119452 1037 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm24063-201ENSMUST00000157491 105 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm29471-201ENSMUST00000190527 700 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm4800-201ENSMUST00000215776 1266 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 AC124686.1-201ENSMUST00000225546 522 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.23□□□□□ -0.93
Cchcr1Q8K2I2 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm5698-201ENSMUST00000178317 724 ntBASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm5857-201ENSMUST00000198953 493 ntBASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm17875-201ENSMUST00000216005 941 ntBASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 AC126028.1-201ENSMUST00000226218 2123 ntBASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC9.22□□□□□ -0.93
Cchcr1Q8K2I2 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cchcr1Q8K2I2 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms