Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm43980-201ENSMUST00000204899 1612 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm22934-201ENSMUST00000103961 132 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm22202-201ENSMUST00000158608 311 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Mir7005-201ENSMUST00000185089 69 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm37102-201ENSMUST00000195740 1105 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm43108-201ENSMUST00000200525 293 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm44380-201ENSMUST00000203125 293 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 AC092710.1-201ENSMUST00000221005 192 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 AC192333.4-201ENSMUST00000224269 981 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 AC139569.1-201ENSMUST00000226080 614 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm25852-201ENSMUST00000082790 130 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Mir185-201ENSMUST00000083530 65 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.25□□□□□ -0.93
Vps53Q8CCB4 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps53Q8CCB4 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm24071-201ENSMUST00000104520 132 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Mir1962-201ENSMUST00000157516 121 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm24883-201ENSMUST00000158391 281 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm28266-201ENSMUST00000191410 439 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm38047-201ENSMUST00000193690 1133 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm18988-201ENSMUST00000205601 746 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm45549-201ENSMUST00000210180 975 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm24046-201ENSMUST00000083111 165 ntBASIC9.24□□□□□ -0.93
Vps53Q8CCB4 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps53Q8CCB4 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms