Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm26014-201ENSMUST00000104405 132 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm12838-201ENSMUST00000116278 325 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm22847-201ENSMUST00000157707 105 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm36961-201ENSMUST00000191980 132 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm5541-201ENSMUST00000193248 1113 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm37339-201ENSMUST00000194142 392 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm18243-201ENSMUST00000220756 887 ntBASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm11969-201ENSMUST00000118848 356 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm14824-201ENSMUST00000119421 737 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm24883-201ENSMUST00000158391 281 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm24576-201ENSMUST00000175508 248 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm40319-201ENSMUST00000199785 481 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 AC099629.1-201ENSMUST00000226778 464 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm16391-201ENSMUST00000086601 447 ntBASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ccdc60Q8C4J0 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm25273-201ENSMUST00000104295 115 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm16276-201ENSMUST00000131218 262 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm17129-201ENSMUST00000168168 505 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm20452-201ENSMUST00000174686 513 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm43694-201ENSMUST00000200773 1119 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm42887-201ENSMUST00000202469 1119 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm8575-201ENSMUST00000210262 521 ntBASIC9.93□□□□□ -0.82
Ccdc60Q8C4J0 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms