Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc88cQ6VGS5 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc88cQ6VGS5 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc88cQ6VGS5 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm23484-201ENSMUST00000104178 131 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm22687-201ENSMUST00000158301 105 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm9286-201ENSMUST00000173586 508 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Gm5386-201ENSMUST00000121749 2450 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.65□□□□□ -1.02
Ccdc88cQ6VGS5 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Ccdc88cQ6VGS5 Gm5761-201ENSMUST00000119238 834 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm42696-201ENSMUST00000199859 1142 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm19092-201ENSMUST00000209036 969 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm8804-201ENSMUST00000212292 798 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm10286-201ENSMUST00000093603 5077 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm24986-201ENSMUST00000104452 132 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm6490-201ENSMUST00000111862 461 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm6491-201ENSMUST00000118273 990 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm13521-201ENSMUST00000118922 866 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm6838-201ENSMUST00000172851 582 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43560-201ENSMUST00000198100 773 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc88cQ6VGS5 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms