Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Mir8099-2-201ENSMUST00000183568 127 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Mir6340-201ENSMUST00000183857 119 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Mir8099-1-201ENSMUST00000184238 127 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm28239-201ENSMUST00000190225 447 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm6729-201ENSMUST00000165173 1452 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm14450-201ENSMUST00000119984 240 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm8164-201ENSMUST00000169120 1192 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm26505-201ENSMUST00000176208 166 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm4545-201ENSMUST00000190797 603 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm8925-201ENSMUST00000197212 763 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm42558-201ENSMUST00000200982 265 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm6807-201ENSMUST00000077435 888 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps54Q5SPW0 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm25167-201ENSMUST00000104188 120 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm24195-201ENSMUST00000116804 137 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm11585-201ENSMUST00000120901 569 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms