Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Trav22-201ENSMUST00000198117 346 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gm44306-201ENSMUST00000203058 203 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC7.8□□□□□ -1.16
Nup43P59235 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 AC132304.1-201ENSMUST00000218860 135 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm5173-201ENSMUST00000219616 950 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm8153-201ENSMUST00000219844 952 ntBASIC7.8□□□□□ -1.16
Nup43P59235 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 AC192333.4-201ENSMUST00000224269 981 ntBASIC7.8□□□□□ -1.16
Nup43P59235 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Tssk4-206ENSMUST00000228041 1217 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Nup43P59235 Fabp5l2-201ENSMUST00000072582 408 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Gm21957-201ENSMUST00000073056 438 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gm23102-201ENSMUST00000083724 116 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gm1982-201ENSMUST00000188615 1887 ntBASIC7.8□□□□□ -1.16
Nup43P59235 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.8□□□□□ -1.16
Nup43P59235 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 Gm26628-201ENSMUST00000181028 1719 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup43P59235 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup43P59235 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Gm44531-201ENSMUST00000208364 2000 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Cdh26-202ENSMUST00000108912 2908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm12401-201ENSMUST00000118435 228 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm11676-201ENSMUST00000120443 490 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm14300-201ENSMUST00000120800 946 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm12096-201ENSMUST00000121149 829 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm15188-201ENSMUST00000121264 704 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm15057-201ENSMUST00000121516 534 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm21990-201ENSMUST00000124692 383 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm26184-201ENSMUST00000157686 131 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm18416-201ENSMUST00000175635 1003 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm7132-201ENSMUST00000182302 984 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm26915-201ENSMUST00000183080 748 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm29577-201ENSMUST00000186427 693 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm28677-202ENSMUST00000186904 615 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm38306-201ENSMUST00000193954 237 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm42525-201ENSMUST00000196257 527 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm42593-201ENSMUST00000198469 377 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm43805-201ENSMUST00000198488 824 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Gm5981-201ENSMUST00000199912 487 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm5885-202ENSMUST00000203357 528 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm5307-201ENSMUST00000204772 760 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Gm5609-201ENSMUST00000210008 1267 ntBASIC7.79□□□□□ -1.16
Nup43P59235 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup43P59235 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup43P59235 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.79□□□□□ -1.16
Nup43P59235 AC123058.1-201ENSMUST00000223748 437 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms