Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC134577.2-201ENSMUST00000228541 715 ntBASIC8.66□□□□□ -1.02
Tpm1P58771 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tpm1P58771 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tpm1P58771 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Tpm1P58771 Gm5619-201ENSMUST00000071172 760 ntBASIC8.66□□□□□ -1.02
Tpm1P58771 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.66□□□□□ -1.02
Tpm1P58771 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Tpm1P58771 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.66□□□□□ -1.02
Tpm1P58771 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tpm1P58771 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tpm1P58771 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tpm1P58771 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Tpm1P58771 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Tpm1P58771 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Tpm1P58771 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm12517-201ENSMUST00000122082 425 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm8868-201ENSMUST00000173591 577 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm26957-201ENSMUST00000182645 977 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm17530-201ENSMUST00000194336 472 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm42779-201ENSMUST00000198807 406 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC8.65□□□□□ -1.02
Tpm1P58771 AC105950.2-201ENSMUST00000220938 368 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Gm7239-201ENSMUST00000220981 860 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Gm5614-201ENSMUST00000091097 318 ntBASIC8.65□□□□□ -1.02
Tpm1P58771 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tpm1P58771 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Tpm1P58771 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Tpm1P58771 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Tpm1P58771 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Tpm1P58771 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Tpm1P58771 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Tpm1P58771 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Tpm1P58771 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Tpm1P58771 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Tpm1P58771 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Tpm1P58771 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Tpm1P58771 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm22760-201ENSMUST00000102277 93 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm11676-201ENSMUST00000120443 490 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm26505-201ENSMUST00000176208 166 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.64□□□□□ -1.03
Tpm1P58771 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm29453-201ENSMUST00000186428 1279 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm28980-201ENSMUST00000187877 219 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm9729-201ENSMUST00000196364 265 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm43287-201ENSMUST00000197747 600 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm43461-201ENSMUST00000202351 996 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Gm5194-201ENSMUST00000221457 742 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm18621-201ENSMUST00000222677 679 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 AC113178.1-201ENSMUST00000227616 935 ntBASIC8.64□□□□□ -1.03
Tpm1P58771 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.64□□□□□ -1.03
Tpm1P58771 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Tpm1P58771 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Tpm1P58771 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Tpm1P58771 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms