Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp4P35123 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Usp4P35123 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp4P35123 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp4P35123 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp4P35123 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.39□□□□□ -1.07
Usp4P35123 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 CT025548.2-201ENSMUST00000226227 1329 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm26012-201ENSMUST00000104411 128 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm11207-201ENSMUST00000117824 414 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm12297-201ENSMUST00000121380 979 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm25947-201ENSMUST00000180343 110 ntBASIC8.38□□□□□ -1.07
Usp4P35123 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm7577-201ENSMUST00000182543 982 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp4P35123 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp4P35123 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.38□□□□□ -1.07
Usp4P35123 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.38□□□□□ -1.07
Usp4P35123 CT025523.1-201ENSMUST00000228318 694 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp4P35123 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp4P35123 Snora57-201ENSMUST00000093658 148 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm10335-201ENSMUST00000096020 468 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm10132-201ENSMUST00000099431 468 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp4P35123 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
Usp4P35123 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.38□□□□□ -1.07
Usp4P35123 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp4P35123 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.38□□□□□ -1.07
Usp4P35123 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm45885-202ENSMUST00000211520 1383 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm22150-201ENSMUST00000104447 135 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Usp4P35123 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm14427-201ENSMUST00000117183 635 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Gm12206-201ENSMUST00000119795 601 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm15224-201ENSMUST00000120501 388 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm12180-201ENSMUST00000120905 661 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm14813-201ENSMUST00000122291 395 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp4P35123 Gm3760-201ENSMUST00000167475 804 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp4P35123 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp4P35123 Gm37533-201ENSMUST00000193848 545 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm19148-201ENSMUST00000197045 429 ntBASIC8.37□□□□□ -1.07
Usp4P35123 Gm44203-201ENSMUST00000203134 307 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms