Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RxrbP28704 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.12□□□□□ -1.11
RxrbP28704 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.12□□□□□ -1.11
RxrbP28704 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxrbP28704 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC8.11□□□□□ -1.11
RxrbP28704 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm11348-201ENSMUST00000118813 318 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm12312-201ENSMUST00000120351 644 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.11□□□□□ -1.11
RxrbP28704 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC8.11□□□□□ -1.11
RxrbP28704 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm26957-201ENSMUST00000182645 977 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm3011-201ENSMUST00000215669 582 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC8.11□□□□□ -1.11
RxrbP28704 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Arhgef33-210ENSMUST00000225548 456 ntBASIC8.11□□□□□ -1.11
RxrbP28704 AC139130.1-201ENSMUST00000228281 620 ntBASIC8.11□□□□□ -1.11
RxrbP28704 AC165437.1-201ENSMUST00000228640 536 ntBASIC8.11□□□□□ -1.11
RxrbP28704 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm21957-201ENSMUST00000073056 438 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxrbP28704 AC131068.3-201ENSMUST00000228438 1456 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 AC156790.4-202ENSMUST00000228838 1418 ntBASIC8.11□□□□□ -1.11
RxrbP28704 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxrbP28704 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
RxrbP28704 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Cldn12-203ENSMUST00000115446 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RxrbP28704 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm22268-201ENSMUST00000104009 131 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm15018-201ENSMUST00000117090 633 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm6630-201ENSMUST00000119199 454 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm12757-201ENSMUST00000119465 800 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm24597-201ENSMUST00000122503 300 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC8.1□□□□□ -1.11
RxrbP28704 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm8065-201ENSMUST00000164048 605 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms