Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
P20040 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.98□□□□□ -1.29
P20040 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.98□□□□□ -1.29
P20040 Gm8802-201ENSMUST00000118633 740 ntBASIC6.98□□□□□ -1.29
P20040 Gm15028-201ENSMUST00000120295 370 ntBASIC6.98□□□□□ -1.29
P20040 Gm15192-201ENSMUST00000121005 293 ntBASIC6.98□□□□□ -1.29
P20040 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gm26048-201ENSMUST00000157305 142 ntBASIC6.98□□□□□ -1.29
P20040 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.98□□□□□ -1.29
P20040 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gm25082-201ENSMUST00000177296 255 ntBASIC6.98□□□□□ -1.29
P20040 Snhg7-201ENSMUST00000181621 139 ntBASIC6.98□□□□□ -1.29
P20040 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
P20040 Gm37506-201ENSMUST00000192008 143 ntBASIC6.98□□□□□ -1.29
P20040 Gm5981-201ENSMUST00000199912 487 ntBASIC6.98□□□□□ -1.29
P20040 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gm43934-201ENSMUST00000205095 388 ntBASIC6.98□□□□□ -1.29
P20040 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.98□□□□□ -1.29
P20040 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
P20040 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.98□□□□□ -1.29
P20040 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
P20040 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC6.98□□□□□ -1.29
P20040 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.98□□□□□ -1.29
P20040 AC170188.1-201ENSMUST00000223710 1963 ntBASIC6.98□□□□□ -1.29
P20040 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
P20040 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
P20040 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
P20040 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
P20040 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC6.97□□□□□ -1.29
P20040 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
P20040 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
P20040 Gm25761-201ENSMUST00000103983 128 ntBASIC6.97□□□□□ -1.29
P20040 Gm22927-201ENSMUST00000104268 131 ntBASIC6.97□□□□□ -1.29
P20040 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Gm8065-201ENSMUST00000164048 605 ntBASIC6.97□□□□□ -1.29
P20040 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Gm26980-201ENSMUST00000183321 395 ntBASIC6.97□□□□□ -1.29
P20040 Scgb2b30-201ENSMUST00000187013 336 ntBASIC6.97□□□□□ -1.29
P20040 Gm29175-201ENSMUST00000189500 402 ntBASIC6.97□□□□□ -1.29
P20040 Scgb2b10-201ENSMUST00000191403 318 ntBASIC6.97□□□□□ -1.29
P20040 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
P20040 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.97□□□□□ -1.29
P20040 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC6.97□□□□□ -1.29
P20040 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC6.97□□□□□ -1.29
P20040 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.97□□□□□ -1.29
P20040 Gm16475-202ENSMUST00000209033 528 ntBASIC6.97□□□□□ -1.29
P20040 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 AC131100.1-201ENSMUST00000226328 470 ntBASIC6.97□□□□□ -1.29
P20040 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.97□□□□□ -1.29
P20040 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
P20040 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
P20040 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.97□□□□□ -1.29
P20040 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
P20040 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P20040 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
P20040 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.96□□□□□ -1.29
P20040 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
P20040 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
P20040 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
P20040 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
P20040 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
P20040 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
P20040 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P20040 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
P20040 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
P20040 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
P20040 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms