Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm24665-201ENSMUST00000104160 129 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm14274-201ENSMUST00000117182 615 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm15504-201ENSMUST00000119674 265 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm22207-201ENSMUST00000158609 317 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm20452-201ENSMUST00000174686 513 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm24824-201ENSMUST00000175097 78 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm5710-201ENSMUST00000183020 995 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Mir6981-201ENSMUST00000184293 115 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm43610-201ENSMUST00000199117 365 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm5723-201ENSMUST00000203096 432 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm45698-201ENSMUST00000208537 1135 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Vmn2r-ps88-201ENSMUST00000209168 804 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm18204-201ENSMUST00000209835 793 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Olfr471-201ENSMUST00000210091 936 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm8058-201ENSMUST00000217247 587 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm26397-201ENSMUST00000083703 134 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sdc1P18828 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sdc1P18828 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.28□□□□□ -1.4
Sdc1P18828 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sdc1P18828 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sdc1P18828 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sdc1P18828 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Sdc1P18828 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 AC187103.1-202ENSMUST00000223904 1536 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm13215-201ENSMUST00000117559 472 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm15033-201ENSMUST00000118188 673 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm13921-201ENSMUST00000119411 463 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm11955-201ENSMUST00000119801 470 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm12312-201ENSMUST00000120351 644 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm13586-201ENSMUST00000121784 464 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Sdc1P18828 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm6467-201ENSMUST00000171547 609 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms