Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm38099-201ENSMUST00000193280 3170 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm14676-201ENSMUST00000117722 858 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm15033-201ENSMUST00000118188 673 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm11649-201ENSMUST00000118214 375 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm15464-201ENSMUST00000118718 431 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm7645-201ENSMUST00000119008 788 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm10224-201ENSMUST00000119496 615 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm25767-201ENSMUST00000158572 124 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm23823-201ENSMUST00000158740 124 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Ang-ps1-201ENSMUST00000162314 436 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm27651-201ENSMUST00000183465 246 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm9553-201ENSMUST00000185703 996 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm20281-201ENSMUST00000188225 267 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC6.35□□□□□ -1.39
Hmgb3O54879 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm45900-201ENSMUST00000211879 409 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm9110-201ENSMUST00000219035 617 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 AC161374.2-201ENSMUST00000223662 596 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 AC167019.4-201ENSMUST00000226494 1070 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 AC139130.1-201ENSMUST00000228281 620 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm16026-201ENSMUST00000094774 580 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.35□□□□□ -1.39
Hmgb3O54879 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hmgb3O54879 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hmgb3O54879 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Grik1-210ENSMUST00000228034 2708 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm32072-201ENSMUST00000200803 1434 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm24665-201ENSMUST00000104160 129 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm15571-201ENSMUST00000119887 637 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm12192-201ENSMUST00000120146 487 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms