Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Sec61a2Q9JLR1 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm12142-201ENSMUST00000117114 485 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm13682-201ENSMUST00000117524 702 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm14000-201ENSMUST00000118670 233 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm11220-201ENSMUST00000118844 475 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm14908-201ENSMUST00000120930 1286 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm12780-201ENSMUST00000122458 645 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm24063-201ENSMUST00000157491 105 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm26184-201ENSMUST00000157686 131 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm16147-201ENSMUST00000162143 373 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm18828-201ENSMUST00000180475 857 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Mir6974-201ENSMUST00000184381 83 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm29588-201ENSMUST00000185738 298 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm29577-201ENSMUST00000186427 693 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm28926-201ENSMUST00000191063 680 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm8010-201ENSMUST00000194128 873 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm42698-201ENSMUST00000197790 762 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm6308-201ENSMUST00000203226 313 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm43928-201ENSMUST00000203737 409 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm2734-201ENSMUST00000208561 743 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm45475-201ENSMUST00000209381 309 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm45674-201ENSMUST00000210043 450 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm272-201ENSMUST00000222073 919 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC163638.1-201ENSMUST00000224818 392 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC140368.1-202ENSMUST00000226131 658 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC126691.2-201ENSMUST00000226185 249 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AC101831.1-201ENSMUST00000228245 691 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 AW822252-205ENSMUST00000192662 1352 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm8605-201ENSMUST00000221619 1370 ntBASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61a2Q9JLR1 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms