Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm23706-201ENSMUST00000104369 82 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm14032-201ENSMUST00000117686 1026 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm4919-201ENSMUST00000117825 604 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm11922-201ENSMUST00000118967 475 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm13921-201ENSMUST00000119411 463 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm11955-201ENSMUST00000119801 470 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm15192-201ENSMUST00000121005 293 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm5270-201ENSMUST00000121506 1002 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm13586-201ENSMUST00000121784 464 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm24050-201ENSMUST00000158623 290 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Mir3085-201ENSMUST00000175493 89 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm43471-201ENSMUST00000197550 467 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm43840-201ENSMUST00000199444 484 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm9354-201ENSMUST00000209075 468 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 AC160635.1-201ENSMUST00000216731 474 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 AC132260.2-201ENSMUST00000224482 344 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 AC154595.1-201ENSMUST00000225533 1059 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 AC133189.3-201ENSMUST00000226269 878 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3a1Q8K4Z5 Gm37902-201ENSMUST00000192839 1683 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm12993-201ENSMUST00000119900 479 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm12773-201ENSMUST00000120134 587 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm26408-201ENSMUST00000157672 127 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm25372-201ENSMUST00000158161 255 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm16103-201ENSMUST00000163003 1279 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm25082-201ENSMUST00000177296 255 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm5327-201ENSMUST00000182864 1009 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm17995-201ENSMUST00000209266 530 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 AC124196.1-201ENSMUST00000225970 1032 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sf3a1Q8K4Z5 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3a1Q8K4Z5 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3a1Q8K4Z5 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms