Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Scgb2b30-201ENSMUST00000187013 336 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm29517-201ENSMUST00000190744 351 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Scgb2b10-201ENSMUST00000191403 318 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm45401-201ENSMUST00000209456 733 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 AC134917.3-201ENSMUST00000222057 1283 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 AC124397.1-201ENSMUST00000224296 653 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 CT009550.3-201ENSMUST00000228542 455 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Mir486-201ENSMUST00000093576 128 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm12834-201ENSMUST00000121855 2829 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm44986-201ENSMUST00000206292 2829 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC153955.4-201ENSMUST00000217069 2752 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm37633-201ENSMUST00000192858 2700 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm23131-201ENSMUST00000104253 132 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm12788-201ENSMUST00000119090 308 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm14301-201ENSMUST00000120181 324 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm13674-201ENSMUST00000121276 823 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm11295-201ENSMUST00000121379 803 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm13466-201ENSMUST00000121515 999 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm11233-201ENSMUST00000122357 634 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm3011-201ENSMUST00000215669 582 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC131745.3-201ENSMUST00000223582 554 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC163660.3-202ENSMUST00000224917 464 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC174797.4-201ENSMUST00000225510 347 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 AC207128.1-201ENSMUST00000225928 799 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm42899-201ENSMUST00000197034 2667 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm37334-201ENSMUST00000192325 2938 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm17229-202ENSMUST00000166792 1753 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm44834-201ENSMUST00000206671 1396 ntBASIC7.55□□□□□ -1.2
Clrn1Q8K445 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Clrn1Q8K445 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Clrn1Q8K445 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms