Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm26264-201ENSMUST00000083278 159 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.84□□□□□ -1
Ccdc38Q8CDN8 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ccdc38Q8CDN8 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm26344-201ENSMUST00000104553 132 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm11951-201ENSMUST00000116005 431 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm13224-201ENSMUST00000119586 94 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm12402-201ENSMUST00000120536 334 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm11585-201ENSMUST00000120901 569 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm13726-201ENSMUST00000121278 794 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm32102-201ENSMUST00000196885 241 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm43560-201ENSMUST00000198100 773 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm8767-201ENSMUST00000215786 1070 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm7239-201ENSMUST00000220981 860 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC123738.1-201ENSMUST00000224796 773 ntBASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Ccdc38Q8CDN8 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm11621-201ENSMUST00000118253 589 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm371-201ENSMUST00000142240 1245 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm24362-201ENSMUST00000183220 416 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm28980-201ENSMUST00000187877 219 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm43310-201ENSMUST00000198975 820 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms