Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 AC154482.1-201ENSMUST00000223248 2483 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm26455-201ENSMUST00000175300 92 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm42603-201ENSMUST00000199893 2146 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm42965-201ENSMUST00000201254 250 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm39121-201ENSMUST00000208847 525 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm3774-201ENSMUST00000209773 435 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 AC132304.1-201ENSMUST00000218860 135 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 AC151982.1-201ENSMUST00000223546 464 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 AC167019.4-201ENSMUST00000226494 1070 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm5316-201ENSMUST00000050391 270 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 AC154806.2-201ENSMUST00000227212 2385 ntBASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.27□□□□□ -0.93
Vps53Q8CCB4 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Phf7-206ENSMUST00000228437 1373 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm43314-201ENSMUST00000196744 2231 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm12838-201ENSMUST00000116278 325 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm13573-201ENSMUST00000116410 631 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm13458-201ENSMUST00000118239 367 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm14519-201ENSMUST00000118490 312 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm15049-201ENSMUST00000120474 463 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm1947-201ENSMUST00000122451 910 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm43461-201ENSMUST00000202351 996 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Klra13-ps-203ENSMUST00000204367 850 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm43934-201ENSMUST00000205095 388 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm6579-201ENSMUST00000208224 865 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 CT009515.2-201ENSMUST00000226126 736 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 AC122877.1-201ENSMUST00000228873 218 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm10805-201ENSMUST00000099710 399 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm37258-201ENSMUST00000191734 1627 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 CT009480.1-201ENSMUST00000225771 4480 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Vps53Q8CCB4 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms