Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp47Q8BY87 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.05□□□□□ -0.64
Usp47Q8BY87 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm24462-201ENSMUST00000102430 106 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm22152-201ENSMUST00000116966 125 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm16523-201ENSMUST00000121253 592 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm29562-201ENSMUST00000190113 904 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm42464-202ENSMUST00000198111 774 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 AC162183.1-201ENSMUST00000224843 472 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Cthrc1-204ENSMUST00000226433 596 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 AC165154.2-201ENSMUST00000227310 336 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC11.04□□□□□ -0.64
Usp47Q8BY87 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp47Q8BY87 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm28266-201ENSMUST00000191410 439 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Ighv1-17-201ENSMUST00000194435 350 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm43553-201ENSMUST00000200900 685 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm43226-201ENSMUST00000202438 259 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm5314-201ENSMUST00000204852 466 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm45925-202ENSMUST00000219904 1136 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 AC123920.1-201ENSMUST00000221449 384 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 AC139323.1-201ENSMUST00000223370 1040 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm5250-201ENSMUST00000059065 321 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm42576-201ENSMUST00000202336 2846 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm25725-201ENSMUST00000104528 130 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm11443-201ENSMUST00000118790 479 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm9378-201ENSMUST00000120315 471 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm12632-201ENSMUST00000121223 495 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm19815-201ENSMUST00000175818 335 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm20111-201ENSMUST00000184830 319 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm29355-201ENSMUST00000188178 697 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm28953-201ENSMUST00000188336 697 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm20788-201ENSMUST00000190538 697 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm37395-201ENSMUST00000194721 697 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm37724-201ENSMUST00000195240 1221 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm3103-201ENSMUST00000198073 752 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm42424-201ENSMUST00000198319 376 ntBASIC11.03□□□□□ -0.64
Usp47Q8BY87 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms