Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Kng2-201ENSMUST00000039338 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm14279-201ENSMUST00000117142 332 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm10243-201ENSMUST00000117571 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm11810-201ENSMUST00000118311 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm15574-201ENSMUST00000119937 405 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm26321-201ENSMUST00000157740 242 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm24530-201ENSMUST00000157948 288 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Mir6409-201ENSMUST00000184957 92 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm4856-201ENSMUST00000192696 1091 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm43471-201ENSMUST00000197550 467 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm1969-201ENSMUST00000198125 1220 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm43772-201ENSMUST00000202052 379 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm45725-201ENSMUST00000212962 337 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm10247-201ENSMUST00000090395 333 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm38123-201ENSMUST00000194990 2779 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 AC163040.1-201ENSMUST00000222979 4288 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm44763-201ENSMUST00000208287 2019 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm13255-201ENSMUST00000117255 547 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm46231-201ENSMUST00000220152 314 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 AC154461.4-201ENSMUST00000224878 468 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm5250-201ENSMUST00000059065 321 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b2Q3UJB0 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm44013-201ENSMUST00000204392 2262 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm13414-201ENSMUST00000117516 727 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm12851-201ENSMUST00000117920 421 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm13240-201ENSMUST00000120042 565 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm7244-201ENSMUST00000164658 455 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm9027-201ENSMUST00000165914 661 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm9142-201ENSMUST00000187161 955 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms