Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm38195-201ENSMUST00000194247 1499 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm6275-201ENSMUST00000118971 1122 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm12361-201ENSMUST00000119806 1044 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm15009-201ENSMUST00000121387 322 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm6044-201ENSMUST00000121819 499 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm11233-201ENSMUST00000122357 634 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm10086-201ENSMUST00000136334 354 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx4Q07424 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm18779-201ENSMUST00000173444 577 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm26980-201ENSMUST00000183321 395 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 AC153968.1-201ENSMUST00000215584 334 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 AC144783.1-201ENSMUST00000219103 960 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Snora74a-201ENSMUST00000083715 196 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm36938-201ENSMUST00000191612 2696 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm28451-201ENSMUST00000189311 2560 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Gm5316-202ENSMUST00000185734 3096 ntBASIC6.24□□□□□ -1.41
Cdx4Q07424 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx4Q07424 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms