Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm14267-208ENSMUST00000228324 1189 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Cntn3Q07409 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm3931-201ENSMUST00000119038 455 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm8312-201ENSMUST00000119380 618 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm18779-201ENSMUST00000173444 577 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Mir6415-201ENSMUST00000184064 100 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Mir6919-201ENSMUST00000185146 62 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm37708-201ENSMUST00000192337 895 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm38154-201ENSMUST00000195444 340 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm23604-202ENSMUST00000198428 137 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.66□□□□□ -1.02
Cntn3Q07409 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC8.66□□□□□ -1.02
Cntn3Q07409 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm46313-201ENSMUST00000220463 547 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Gm5619-201ENSMUST00000071172 760 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.66□□□□□ -1.02
Cntn3Q07409 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cntn3Q07409 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC8.66□□□□□ -1.02
Cntn3Q07409 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm23835-201ENSMUST00000104439 132 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm26344-201ENSMUST00000104553 132 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm15062-201ENSMUST00000120567 367 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm6451-201ENSMUST00000121488 717 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm12998-201ENSMUST00000122445 789 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm25265-201ENSMUST00000158520 347 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cntn3Q07409 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Mir6912-201ENSMUST00000184456 70 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm37371-201ENSMUST00000194837 392 ntBASIC8.65□□□□□ -1.02
Cntn3Q07409 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms